Saturday, 13 October 2018

oxygen and other nomb 3

Oxygen revolution[edit]


Lithified stromatolites on the shores of Lake ThetisWestern Australia. Archean stromatolites are the first direct fossil traces of life on Earth.

banded iron formation from the 3.15 Ga Moories Group, Barberton Greenstone BeltSouth Africa. Red layers represent the times when oxygen was available; gray layers were formed in anoxic circumstances.
The earliest cells absorbed energy and food from the surrounding environment. They used fermentation, the breakdown of more complex compounds into less complex compounds with less energy, and used the energy so liberated to grow and reproduce. Fermentation can only occur in an anaerobic (oxygen-free) environment. The evolution of photosynthesis made it possible for cells to derive energy from the Sun.[100]:377
Most of the life that covers the surface of the Earth depends directly or indirectly on photosynthesis. The most common form, oxygenic photosynthesis, turns carbon dioxide, water, and sunlight into food. It captures the energy of sunlight in energy-rich molecules such as ATP, which then provide the energy to make sugars. To supply the electrons in the circuit, hydrogen is stripped from water, leaving oxygen as a waste product.[101] Some organisms, including purple bacteria and green sulfur bacteria, use an anoxygenic form of photosynthesis that uses alternatives to hydrogen stripped from water as electron donors; examples are hydrogen sulfide, sulfur and iron. Such extremophile organisms are restricted to otherwise inhospitable environments such as hot springs and hydrothermal vents.[100]:379–382[102]
The simpler anoxygenic form arose about 3.8 Ga, not long after the appearance of life. The timing of oxygenic photosynthesis is more controversial; it had certainly appeared by about 2.4 Ga, but some researchers put it back as far as 3.2 Ga.[101] The latter "probably increased global productivity by at least two or three orders of magnitude".[103][104] Among the oldest remnants of oxygen-producing lifeforms are fossil stromatolites.[103][104][61]
At first, the released oxygen was bound up with limestoneiron, and other minerals. The oxidized iron appears as red layers in geological strata called banded iron formations that formed in abundance during the Siderian period (between 2500 Ma and 2300 Ma).[2]:133 When most of the exposed readily reacting minerals were oxidized, oxygen finally began to accumulate in the atmosphere. Though each cell only produced a minute amount of oxygen, the combined metabolism of many cells over a vast time transformed Earth's atmosphere to its current state. This was Earth's third atmosphere.[105]:50–51[63]:83–84,116–117
Some oxygen was stimulated by solar ultraviolet radiation to form ozone, which collected in a layer near the upper part of the atmosphere. The ozone layer absorbed, and still absorbs, a significant amount of the ultraviolet radiation that once had passed through the atmosphere. It allowed cells to colonize the surface of the ocean and eventually the land: without the ozone layer, ultraviolet radiation bombarding land and sea would have caused unsustainable levels of mutation in exposed cells.[106][59]:219–220
Photosynthesis had another major impact. Oxygen was toxic; much life on Earth probably died out as its levels rose in what is known as the oxygen catastrophe. Resistant forms survived and thrived, and some developed the ability to use oxygen to increase their metabolism and obtain more energy from the same food.[106]

Snowball Earth[edit]

The natural evolution of the Sun made it progressively more luminous during the Archean and Proterozoic eons; the Sun's luminosity increases 6% every billion years.[59]:165 As a result, the Earth began to receive more heat from the Sun in the Proterozoic eon. However, the Earth did not get warmer. Instead, the geological record suggests it cooled dramatically during the early Proterozoic. Glacial deposits found in South Africa date back to 2.2 Ga, at which time, based on paleomagneticevidence, they must have been located near the equator. Thus, this glaciation, known as the Huronian glaciation, may have been global. Some scientists suggest this was so severe that the Earth was frozen over from the poles to the equator, a hypothesis called Snowball Earth.[107]
The Huronian ice age might have been caused by the increased oxygen concentration in the atmosphere, which caused the decrease of methane (CH4) in the atmosphere. Methane is a strong greenhouse gas, but with oxygen it reacts to form CO2, a less effective greenhouse gas.[59]:172 When free oxygen became available in the atmosphere, the concentration of methane could have decreased dramatically, enough to counter the effect of the increasing heat flow from the Sun.[108]
However, the term Snowball Earth is more commonly used to describe later extreme ice ages during the Cryogenian period. There were four periods, each lasting about 10 million years, between 750 and 580 million years ago, when the earth is thought to have been covered with ice apart from the highest mountains, and average temperatures were about −50 °C (−58 °F).[109] The snowball may have been partly due to the location of the supercontintent Rodinia straddling the Equator. Carbon dioxide combines with rain to weather rocks to form carbonic acid, which is then washed out to sea, thus extracting the greenhouse gas from the atmosphere. When the continents are near the poles, the advance of ice covers the rocks, slowing the reduction in carbon dioxide, but in the Cryogienian the weathering of Rodinia was able to continue unchecked until the ice advanced to the tropics. The process may have finally been reversed by the emission of carbon dioxide from volcanoes or the destabilization of methane gas hydrates. According to the alternative Slushball Earth theory, even at the height of the ice ages there was still open water at the Equator.[110][111]

Emergence of eukaryotes[edit]


Chloroplasts in the cells of a moss
Modern taxonomy classifies life into three domains. The time of their origin is uncertain. The Bacteria domain probably first split off from the other forms of life (sometimes called Neomura), but this supposition is controversial. Soon after this, by 2 Ga,[112]the Neomura split into the Archaea and the Eukarya. Eukaryotic cells (Eukarya) are larger and more complex than prokaryotic cells (Bacteria and Archaea), and the origin of that complexity is only now becoming known.[citation needed]
Around this time, the first proto-mitochondrion was formed. A bacterial cell related to today's Rickettsia,[113] which had evolved to metabolize oxygen, entered a larger prokaryotic cell, which lacked that capability. Perhaps the large cell attempted to digest the smaller one but failed (possibly due to the evolution of prey defenses). The smaller cell may have tried to parasitize the larger one. In any case, the smaller cell survived inside the larger cell. Using oxygen, it metabolized the larger cell's waste products and derived more energy. Part of this excess energy was returned to the host. The smaller cell replicated inside the larger one. Soon, a stable symbiosis developed between the large cell and the smaller cells inside it. Over time, the host cell acquired some genes from the smaller cells, and the two kinds became dependent on each other: the larger cell could not survive without the energy produced by the smaller ones, and these, in turn, could not survive without the raw materials provided by the larger cell. The whole cell is now considered a single organism, and the smaller cells are classified as organelles called mitochondria.[114]
A similar event occurred with photosynthetic cyanobacteria[115] entering large heterotrophic cells and becoming chloroplasts.[105]:60–61[116]:536–539 Probably as a result of these changes, a line of cells capable of photosynthesis split off from the other eukaryotes more than 1 billion years ago. There were probably several such inclusion events. Besides the well-established endosymbiotic theory of the cellular origin of mitochondria and chloroplasts, there are theories that cells led to peroxisomesspirochetes led to cilia and flagella, and that perhaps a DNA virus led to the cell nucleus,[117][118] though none of them are widely accepted.[119]
Archaeans, bacteria, and eukaryotes continued to diversify and to become more complex and better adapted to their environments. Each domain repeatedly split into multiple lineages, although little is known about the history of the archaea and bacteria. Around 1.1 Ga, the supercontinent Rodinia was assembling.[120][121] The plantanimal, and fungi lines had split, though they still existed as solitary cells. Some of these lived in colonies, and gradually a division of labor began to take place; for instance, cells on the periphery might have started to assume different roles from those in the interior. Although the division between a colony with specialized cells and a multicellular organism is not always clear, around 1 billion years ago[122], the first multicellular plants emerged, probably green algae.[123] Possibly by around 900 Ma[116]:488 true multicellularity had also evolved in animals.[citation needed]
At first, it probably resembled today's sponges, which have totipotent cells that allow a disrupted organism to reassemble itself.[116]:483–487 As the division of labor was completed in all lines of multicellular organisms, cells became more specialized and more dependent on each other; isolated cells would die.[citation needed]

Supercontinents in the Proterozoic[edit]


A reconstruction of Pannotia (550 Ma).
Reconstructions of tectonic plate movement in the past 250 million years (the Cenozoic and Mesozoic eras) can be made reliably using fitting of continental margins, ocean floor magnetic anomalies and paleomagnetic poles. No ocean crust dates back further than that, so earlier reconstructions are more difficult. Paleomagnetic poles are supplemented by geologic evidence such as orogenic belts, which mark the edges of ancient plates, and past distributions of flora and fauna. The further back in time, the scarcer and harder to interpret the data get and the more uncertain the reconstructions.[124]:370
Throughout the history of the Earth, there have been times when continents collided and formed a supercontinent, which later broke up into new continents. About 1000 to 830 Ma, most continental mass was united in the supercontinent Rodinia.[124]:370[125] Rodinia may have been preceded by Early-Middle Proterozoic continents called Nuna and Columbia.[124]:374[126][127]
After the break-up of Rodinia about 800 Ma, the continents may have formed another short-lived supercontinent around 550 Ma. The hypothetical supercontinent is sometimes referred to as Pannotia or Vendia.[128]:321–322 The evidence for it is a phase of continental collision known as the Pan-African orogeny, which joined the continental masses of current-day Africa, South America, Antarctica and Australia. The existence of Pannotia depends on the timing of the rifting between Gondwana(which included most of the landmass now in the Southern Hemisphere, as well as the Arabian Peninsula and the Indian subcontinent) and Laurentia (roughly equivalent to current-day North America).[124]:374 It is at least certain that by the end of the Proterozoic eon, most of the continental mass lay united in a position around the south pole.[129]

Late Proterozoic climate and life[edit]


A 580 million year old fossil of Spriggina floundensi, an animal from the Ediacaran period. Such life forms could have been ancestors to the many new forms that originated in the Cambrian Explosion.
The end of the Proterozoic saw at least two Snowball Earths, so severe that the surface of the oceans may have been completely frozen. This happened about 716.5 and 635 Ma, in the Cryogenian period.[130] The intensity and mechanism of both glaciations are still under investigation and harder to explain than the early Proterozoic Snowball Earth.[131] Most paleoclimatologists think the cold episodes were linked to the formation of the supercontinent Rodinia.[132] Because Rodinia was centered on the equator, rates of chemical weathering increased and carbon dioxide (CO2) was taken from the atmosphere. Because CO2 is an important greenhouse gas, climates cooled globally.[citation needed] In the same way, during the Snowball Earths most of the continental surface was covered with permafrost, which decreased chemical weathering again, leading to the end of the glaciations. An alternative hypothesis is that enough carbon dioxide escaped through volcanic outgassing that the resulting greenhouse effect raised global temperatures.[132] Increased volcanic activity resulted from the break-up of Rodinia at about the same time.[citation needed]
The Cryogenian period was followed by the Ediacaran period, which was characterized by a rapid development of new multicellular lifeforms.[133] Whether there is a connection between the end of the severe ice ages and the increase in diversity of life is not clear, but it does not seem coincidental. The new forms of life, called Ediacara biota, were larger and more diverse than ever. Though the taxonomy of most Ediacaran life forms is unclear, some were ancestors of groups of modern life.[134]Important developments were the origin of muscular and neural cells. None of the Ediacaran fossils had hard body parts like skeletons. These first appear after the boundary between the Proterozoic and Phanerozoic eons or Ediacaran and Cambrian periods.[citation needed]

Phanerozoic Eon[edit]

The Phanerozoic is the current eon on Earth, which started approximately 542 million years ago. It consists of three eras: The PaleozoicMesozoic, and Cenozoic,[22]and is the time when multi-cellular life greatly diversified into almost all the organisms known today.[135]
The Paleozoic ("old life") era was the first and longest era of the Phanerozoic eon, lasting from 542 to 251 Ma.[22] During the Paleozoic, many modern groups of life came into existence. Life colonized the land, first plants, then animals. Two major extinctions occurred. The continents formed at the break-up of Pannotia and Rodinia at the end of the Proterozoic slowly moved together again, forming the supercontinent Pangaea in the late Paleozoic.[citation needed]
The Mesozoic ("middle life") era lasted from 251 Ma to 66 Ma.[22] It is subdivided into the TriassicJurassic, and Cretaceous periods. The era began with the Permian–Triassic extinction event, the most severe extinction event in the fossil record; 95% of the species on Earth died out.[136] It ended with the Cretaceous–Paleogene extinction event that wiped out the dinosaurs.[citation needed].
The Cenozoic ("new life") era began at 66 Ma,[22] and is subdivided into the PaleogeneNeogene, and Quaternary periods. These three periods are further split into seven sub-divisions, with the Paleogene composed of The PaleoceneEocene, and Oligocene, the Neogene divided into the MiocenePliocene, and the Quaternary composed of the Pleistocene, and Holocene.[137] Mammals, birds, amphibians, crocodilians, turtles, and lepidosaurs survived the Cretaceous–Paleogene extinction event that killed off the non-avian dinosaurs and many other forms of life, and this is the era during which they diversified into their modern forms.[citation needed]

Tectonics, paleogeography and climate[edit]


Pangaea was a supercontinent that existed from about 300 to 180 Ma. The outlines of the modern continents and other landmasses are indicated on this map.
At the end of the Proterozoic, the supercontinent Pannotia had broken apart into the smaller continents Laurentia, BalticaSiberia and Gondwana.[138] During periods when continents move apart, more oceanic crust is formed by volcanic activity. Because young volcanic crust is relatively hotter and less dense than old oceanic crust, the ocean floors rise during such periods. This causes the sea level to rise. Therefore, in the first half of the Paleozoic, large areas of the continents were below sea level.[citation needed]
Early Paleozoic climates were warmer than today, but the end of the Ordovician saw a short ice age during which glaciers covered the south pole, where the huge continent Gondwana was situated. Traces of glaciation from this period are only found on former Gondwana. During the Late Ordovician ice age, a few mass extinctions took place, in which many brachiopods, trilobites, Bryozoa and corals disappeared. These marine species could probably not contend with the decreasing temperature of the sea water.[139]
The continents Laurentia and Baltica collided between 450 and 400 Ma, during the Caledonian Orogeny, to form Laurussia(also known as Euramerica).[140] Traces of the mountain belt this collision caused can be found in ScandinaviaScotland, and the northern Appalachians. In the Devonian period (416–359 Ma)[22] Gondwana and Siberia began to move towards Laurussia. The collision of Siberia with Laurussia caused the Uralian Orogeny, the collision of Gondwana with Laurussia is called the Variscan or Hercynian Orogeny in Europe or the Alleghenian Orogeny in North America. The latter phase took place during the Carboniferous period (359–299 Ma)[22] and resulted in the formation of the last supercontinent, Pangaea.[60]
By 180 Ma, Pangaea broke up into Laurasia and Gondwana.[citation needed]

Cambrian explosion[edit]


Trilobites first appeared during the Cambrian period and were among the most widespread and diverse groups of Paleozoic organisms.
The rate of the evolution of life as recorded by fossils accelerated in the Cambrian period (542–488 Ma).[22] The sudden emergence of many new species, phyla, and forms in this period is called the Cambrian Explosion. The biological fomenting in the Cambrian Explosion was unpreceded before and since that time.[59]:229 Whereas the Ediacaran life forms appear yet primitive and not easy to put in any modern group, at the end of the Cambrian most modern phyla were already present. The development of hard body parts such as shells, skeletons or exoskeletons in animals like molluscsechinodermscrinoids and arthropods (a well-known group of arthropods from the lower Paleozoic are the trilobites) made the preservation and fossilization of such life forms easier than those of their Proterozoic ancestors. For this reason, much more is known about life in and after the Cambrian than about that of older periods. Some of these Cambrian groups appear complex but are seemingly quite different from modern life; examples are Anomalocaris and Haikouichthys. More recently, however, these seem to have found a place in modern classification.[citation needed]
During the Cambrian, the first vertebrate animals, among them the first fishes, had appeared.[116]:357 A creature that could have been the ancestor of the fishes, or was probably closely related to it, was Pikaia. It had a primitive notochord, a structure that could have developed into a vertebral column later. The first fishes with jaws (Gnathostomata) appeared during the next geological period, the Ordovician. The colonisation of new niches resulted in massive body sizes. In this way, fishes with increasing sizes evolved during the early Paleozoic, such as the titanic placoderm Dunkleosteus, which could grow 7 meters (23 ft) long.[citation needed]
The diversity of life forms did not increase greatly because of a series of mass extinctions that define widespread biostratigraphic units called biomeres.[141] After each extinction pulse, the continental shelf regions were repopulated by similar life forms that may have been evolving slowly elsewhere.[142] By the late Cambrian, the trilobites had reached their greatest diversity and dominated nearly all fossil assemblages.[143]:34

Colonization of land[edit]


Artist's conception of Devonian flora
Oxygen accumulation from photosynthesis resulted in the formation of an ozone layer that absorbed much of the Sun's ultraviolet radiation, meaning unicellular organisms that reached land were less likely to die, and prokaryotes began to multiply and become better adapted to survival out of the water. Prokaryote lineages[144] had probably colonized the land as early as 2.6 Ga[145] even before the origin of the eukaryotes. For a long time, the land remained barren of multicellular organisms. The supercontinent Pannotia formed around 600 Ma and then broke apart a short 50 million years later.[146] Fish, the earliest vertebrates, evolved in the oceans around 530 Ma.[116]:354 A major extinction event occurred near the end of the Cambrian period,[147] which ended 488 Ma.[148]
Several hundred million years ago, plants (probably resembling algae) and fungi started growing at the edges of the water, and then out of it.[149]:138–140 The oldest fossils of land fungi and plants date to 480–460 Ma, though molecular evidence suggests the fungi may have colonized the land as early as 1000 Ma and the plants 700 Ma.[150] Initially remaining close to the water's edge, mutations and variations resulted in further colonization of this new environment. The timing of the first animals to leave the oceans is not precisely known: the oldest clear evidence is of arthropods on land around 450 Ma,[151] perhaps thriving and becoming better adapted due to the vast food source provided by the terrestrial plants. There is also unconfirmed evidence that arthropods may have appeared on land as early as 530 Ma.[152]

Evolution of tetrapods[edit]


Tiktaalik, a fish with limb-like fins and a predecessor of tetrapods. Reconstruction from fossils about 375 million years old.
At the end of the Ordovician period, 443 Ma,[22] additional extinction events occurred, perhaps due to a concurrent ice age.[139]Around 380 to 375 Ma, the first tetrapods evolved from fish.[153] Fins evolved to become limbs that the first tetrapods used to lift their heads out of the water to breathe air. This would let them live in oxygen-poor water, or pursue small prey in shallow water.[153] They may have later ventured on land for brief periods. Eventually, some of them became so well adapted to terrestrial life that they spent their adult lives on land, although they hatched in the water and returned to lay their eggs. This was the origin of the amphibians. About 365 Ma, another period of extinction occurred, perhaps as a result of global cooling.[154] Plants evolved seeds, which dramatically accelerated their spread on land, around this time (by approximately 360 Ma).[155][156]
About 20 million years later (340 Ma[116]:293–296), the amniotic egg evolved, which could be laid on land, giving a survival advantage to tetrapod embryos. This resulted in the divergence of amniotes from amphibians. Another 30 million years (310 Ma[116]:254–256) saw the divergence of the synapsids (including mammals) from the sauropsids (including birds and reptiles). Other groups of organisms continued to evolve, and lines diverged—in fish, insects, bacteria, and so on—but less is known of the details.[citation needed]

Dinosaurs were the dominant terrestrial vertebrates throughout most of the Mesozoic
After yet another, the most severe extinction of the period (251~250 Ma), around 230 Ma, dinosaurs split off from their reptilian ancestors.[157] The Triassic–Jurassic extinction event at 200 Ma spared many of the dinosaurs,[22][158] and they soon became dominant among the vertebrates. Though some mammalian lines began to separate during this period, existing mammals were probably small animals resembling shrews.[116]:169
The boundary between avian and non-avian dinosaurs is not clear, but Archaeopteryx, traditionally considered one of the first birds, lived around 150 Ma.[159]
The earliest evidence for the angiosperms evolving flowers is during the Cretaceous period, some 20 million years later (132 Ma).[160]

Extinctions[edit]

The first of five great mass extinctions was the Ordovician-Silurian extinction. Its possible cause was the intense glaciation of Gondwana, which eventually led to a snowball earth. 60% of marine invertebrates became extinct and 25% of all families.[citation needed]
The second mass extinction was the Late Devonian extinction, probably caused by the evolution of trees, which could have led to the depletion of greenhouse gases (like CO2) or the eutrophication of water. 70% of all species became extinct.[citation needed]
The third mass extinction was the Permian-Triassic, or the Great Dying, event was possibly caused by some combination of the Siberian Traps volcanic event, an asteroid impact, methane hydrate gasification, sea level fluctuations, and a major anoxic event. Either the proposed Wilkes Land crater[161] in Antarctica or Bedout structure off the northwest coast of Australia may indicate an impact connection with the Permian-Triassic extinction. But it remains uncertain whether either these or other proposed Permian-Triassic boundary craters are either real impact craters or even contemporaneous with the Permian-Triassic extinction event. This was by far the deadliest extinction ever, with about 57% of all families and 83% of all genera killed.[162][163]
The fourth mass extinction was the Triassic-Jurassic extinction event in which almost all synapsids and archosaurs became extinct, probably due to new competition from dinosaurs.[citation needed]
The fifth and most recent mass extinction was the K-T extinction. In 66 Ma, a 10-kilometer (6.2 mi) asteroid struck Earth just off the Yucatán Peninsula – somewhere in the south western tip of then Laurasia – where the Chicxulub crater is today. This ejected vast quantities of particulate matter and vapor into the air that occluded sunlight, inhibiting photosynthesis. 75% of all life, including the non-avian dinosaurs, became extinct,[164] marking the end of the Cretaceous period and Mesozoic era.[citation needed]

Diversification of mammals[edit]

The first true mammals evolved in the shadows of dinosaurs and other large archosaurs that filled the world by the late Triassic. The first mammals were very small, and were probably nocturnal to escape predation. Mammal diversification truly began only after the Cretaceous-Paleogene extinction event.[165] By the early Paleocene the earth recovered from the extinction, and mammalian diversity increased. Creatures like Ambulocetus took to the oceans to eventually evolve into whales,[166]whereas some creatures, like primates, took to the trees.[167] This all changed during the mid to late Eocene when the circum-Antarctic current formed between Antarctica and Australia which disrupted weather patterns on a global scale. Grassless savannas began to predominate much of the landscape, and mammals such as Andrewsarchus rose up to become the largest known terrestrial predatory mammal ever,[168] and early whales like Basilosaurus took control of the seas.[citation needed]
The evolution of grass brought a remarkable change to the Earth's landscape, and the new open spaces created pushed mammals to get bigger and bigger. Grass started to expand in the Miocene, and the Miocene is where many modern- day mammals first appeared. Giant ungulates like Paraceratherium and Deinotheriumevolved to rule the grasslands. The evolution of grass also brought primates down from the trees, and started human evolution. The first big cats evolved during this time as well.[169] The Tethys Sea was closed off by the collision of Africa and Europe.[170]
The formation of Panama was perhaps the most important geological event to occur in the last 60 million years. Atlantic and Pacific currents were closed off from each other, which caused the formation of the Gulf Stream, which made Europe warmer. The land bridge allowed the isolated creatures of South America to migrate over to North America, and vice versa.[171] Various species migrated south, leading to the presence in South America of llamas, the spectacled bearkinkajous and jaguars.[citation needed]
Three million years ago saw the start of the Pleistocene epoch, which featured dramatic climactic changes due to the ice ages. The ice ages led to the evolution of modern man in Saharan Africa and expansion. The mega-fauna that dominated fed on grasslands that, by now, had taken over much of the subtropical world. The large amounts of water held in the ice allowed for various bodies of water to shrink and sometimes disappear such as the North Sea and the Bering Strait. It is believed by many that a huge migration took place along Beringia which is why, today, there are camels (which evolved and became extinct in North America), horses (which evolved and became extinct in North America), and Native Americans. The ending of the last ice age coincided with the expansion of man, along with a massive die out of ice age mega-fauna. This extinction, nicknamed "the Sixth Extinction", has been going ever since.[citation needed]

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